Toolbox for keynote review software#

She was a keynote speaker at the 2015 meeting of the Organization for Human Brain Mapping, speaking on the topic of Connectomic Insights into Psychiatric Disorders.

Toolbox for keynote review software#

The faculty for the program includes the originators and developers of the CONN Toolbox and several expert users and teachers to help with the interactive portion of the training: Susan Whitfield-Gabrieli: Software developer and principal speaker at this program. Random Field Theory), and non-parametric permutation/randomization techniques (e.g. Control for multiple comparisons using parametric (e.g. Group- and population-level inferencesand models, including ANOVA, regression, longitudinal, experimental, and mixed within- and between-subject designs.Multiple connectivity analyses and measures, including Seed-Based Correlations (SBC), ROI-to-ROI analyses, complex-network analyses, generalized Psycho-Physiological Interaction models (gPPI), Independent Component Analyses (group-ICA), masked ICA, Amplitude of Low-Frequency Fluctuations (ALFF & fALFF), Intrinsic Connectivity (ICC), Local Homogeneity (LCOR), Global Correlations (GCOR), Multivoxel Pattern Analyses (MVPA), and dynamic connectivity analyses (dyn-ICA, sliding-window correlations).FC histogram plots, BOLD signal carpetplots, Framewise Displacement, GCOR measures, FC-QC correlations) Integrated quality control procedures and measures (e.g.scrubbing, aCompCor, ICA-based denoising, Global Regression, band-pass filtering)

Control of residual physiological and motion artifacts (e.g.Standardized preprocessing pipelines of functional and anatomical volumes powered by SPM12 (including susceptibility distortion correction, motion correction / realignment, slice-timing correction, outlier identification, coregistration, tissue-class segmentation, MNI-normalization, and smoothing).Automatic import tools for BIDSdatasets and fMRIPrep outputs Importing DICOM, ANALYZE, and NIfTI functional and anatomical files, either raw or partially/fully preprocessed volumes.Processing and analysis steps in CONN include: CONN is used to analyze resting state data (rsfMRI) as well as task-related designs.

Software descriptionĬONN is an open-source Matlab/ SPM-based cross-platform software for the computation, display, and analysis of functional connectivity Magnetic Resonance Imaging (fcMRI). Participants will bring their own laptop computers classroom presentations will be followed by substantial time using the packages with expert guidance available. The program consists of five intensive days of training in the use of this software. Also, it has been cited and used in over 400 papers (the second-most cited reference in the Brain Connectivity journal). It is ranked as one of the top 10 most visited and downloaded neuroimaging tools and resources at NITRC, with over 40,000 downloads and a very active user community. CONN is an SPM-based toolbox for functional connectivity analyses in the resting state and during tasks. A premier software package for such analysis is the CONN toolbox, created by Susan Whitfield-Gabrieli and Alfonso Nieto Castañòn. The primary tool for analyzing such data has been correlation-based analysis of the connections between seed regions in the brain. Five to ten minutes of MRI data collection from almost any subject or patient can reveal organized systems of activity in the brain that can be used in a wide variety of ways for basic and clinical research, and even to guide non-invasive brain stimulation. Resting-state functional connectivity has taken the brain imaging community by storm. Fall 2023: 5 Mondays starting NovemVIRTUAL LIVE COURSE